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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VANGL2, Vang-like 2 (van gogh, Drosophila)
Sequence ID:NM_020335
RefSeqGene ID:NG_023420
Entrez Gene ID:57216
Ensembl ID:ENSG00000162738

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160385465 - 160398460

NM_020335 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1296160370363160370658
297557160385437160385697
558678160385851160385971
6791286160388791160389398
12871423160390200160390336
14241559160390841160390976
15601791160393841160394072
17925351160394907160398466

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066354Full LengthBC166628vang-like 2 (van gogh, Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065068  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020335 NP_065068 Q9ULK5 Strabismus

Related Sequences

 
mRNAGenPeptSwissProt
BC166628 AAI66628  
AB033041 BAA86529 Q9ULK5
AK290981 BAF83670 A8K4L6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VANGL2 NP_065068 M.musculus Vangl2 93840 Gene Info NP_277044 99
R.norvegicus Vangl2 289229   NP_001099439 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)