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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRMT12, tRNA methyltransferase 12 homolog (S. cerevisiae)
Sequence ID:NM_017956
Entrez Gene ID:55039
Ensembl ID:ENSG00000183665

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 125463061 - 125465095

NM_017956 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12217125463047125465263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3929724Full LengthBC011713tRNA methyltransferase 12 homolog (S. cerevisiae)
3050210IncompleteBC003057tRNA methyltransferase 12 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060426  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017956 NP_060426 Q53H54 Met_10

Related Sequences

 
mRNAGenPeptSwissProt
BC003057 AAH03057 Q53H54
BC011713 AAH11713 Q53H54
AK000779 BAA91374 Q53H54
AK222727 BAD96447 Q53H54

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRMT12 NP_060426 R.norvegicus Trmt12 314999   NP_001116448 83
M.musculus Trmt12 68260 Gene Info NP_080918 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)