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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PLA2G1B, phospholipase A2, group IB (pancreas)
Sequence ID:NM_000928
Entrez Gene ID:5319
Ensembl ID:ENSG00000170890

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23-q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 120759995 - 120765577

NM_000928 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22227120759914120760119
228355120762736120762863
356515120763663120763822
516585120765522120765591

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40014551Full LengthBC106725phospholipase A2, group IB (pancreas)
40014552Full LengthBC106726phospholipase A2, group IB (pancreas)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000919  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000928 NP_000919 P04054 EC 3.1.1.4 Phospholip_A2_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M21054 AAA36450 P04054 EC 3.1.1.4
BC005386 AAH05386 Q9BS22  
BC106725 AAI06726 P04054 EC 3.1.1.4
BC106726 AAI06727 P04054 EC 3.1.1.4
EU832774 ACE87785    
GQ129318 ACT64452    
AK311830 BAG34772 P04054 EC 3.1.1.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLA2G1B NP_000919 M.musculus Pla2g1b 18778 Gene Info NP_035237 79
R.norvegicus Pla2g1b 29526   NP_113773 77
C.elegans phospholipase 182181   NP_493719 41
C.elegans C07E3.9 182374   NP_496228 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)