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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC88B, Coiled-coil domain containing 88B
Sequence ID:NM_032251
Entrez Gene ID:283234
Ensembl ID:ENSG00000168071

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64110202 - 64118167

 Exon Info From UCSC:
NM_032251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021690Full LengthBC140822coiled-coil domain containing 88B
9021692Full LengthBC140824coiled-coil domain containing 88B
40081870IncompleteBC141866coiled-coil domain containing 88B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032251 NP_115627 A6NC98  

Related Sequences

 
mRNAGenPeptSwissProt
BC040232 AAH40232 A6NC98
BC140822 AAI40823 B2RTU8
BC140824 AAI40825 B2RTU8
BC141866 AAI41867 A6NC98
AY491401 AAR83719 A6NC98
AK074126 BAB84952 Q8TEJ7
AK090436 BAC03417 A6NC98
AL136799 CAB66733 A6NC98

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC88B NP_115627 M.musculus Ccdc88b 78317 Gene Info NP_001074760 78
R.norvegicus Ccdc88b 293698   XP_215206 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)