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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XRCC1, X-ray repair complementing defective repair in Chinese hamster cells 1
Sequence ID:NM_006297
Entrez Gene ID:7515
Ensembl ID:ENSG00000073050

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 44047463 - 44079653

 Exon Info From UCSC:
NM_006297

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4646806Full LengthBC023593X-ray repair complementing defective repair in Chinese hamster cells 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006288  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006297 NP_006288 P18887 BRCT
XRCC1_N

Related Sequences

 
mRNAGenPeptSwissProt
M36089 AAA63270 P18887
BC023593 AAH23593 P18887
AB208781 BAD92018 Q59HH7
AK315332 BAG37732 B2RCY5
AK293542 BAG57023 B4DEB2
AK300163 BAG61945 B4DTD3
CR456728 CAG33009 P18887

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XRCC1 NP_006288 M.musculus Xrcc1 22594 Gene Info NP_033558 86
R.norvegicus Xrcc1 84495   NP_445887 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)