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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXB6, Homeobox B6
Sequence ID:NM_018952
Entrez Gene ID:3216
Ensembl ID:ENSG00000108511

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46673113 - 46682354

NM_018952 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
119464667309846674033
94714394667509746675589
144015754668184146681976
157616864668222346682333

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4548382Full LengthBC014651homeobox B6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061825  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018952 NP_061825 P17509 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
M30597 AAA36004 P17509
S69023 AAD14028 Q16124
BC014651 AAH14651 P17509
DQ890732 ABM81658  
HQ447184 ADQ31671  
AK292200 BAF84889 P17509

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXB6 NP_061825 M.musculus Hoxb6 15414 Gene Info NP_032295 98
R.norvegicus Hoxb6 497986   XP_573182 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)