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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CYP2S1, cytochrome P450, family 2, subfamily S, polypeptide 1
Sequence ID:NM_030622
RefSeqGene ID:NG_007933
Entrez Gene ID:29785
Ensembl ID:ENSG00000167600

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 41699169 - 41713106

NM_030622 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12324169911441699345
2333984170044841700613
3995484170368341703832
5497094170436641704526
7108894170461341704792
89010314170713541707276
103212194170935441709541
122013614171186241712003
136226204171218441713442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5212609Full LengthBC033691cytochrome P450, family 2, subfamily S, polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_085125  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_030622 NP_085125 Q96SQ9 EC 1.14.14.1 p450

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC033691 AAH33691 Q96SQ9 EC 1.14.14.1
AF335278 AAK13498 Q96SQ9 EC 1.14.14.1
AY358603 AAQ88966 Q96SQ9 EC 1.14.14.1
DQ893363 ABM84289    
DQ896681 ABM87680    
AK027605 BAB55227 Q96SQ9 EC 1.14.14.1
AK296087 BAG58842 B4DJI0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CYP2S1 NP_085125 M.musculus Cyp2s1 74134 Gene Info NP_083051 79
R.norvegicus Cyp2s1 308445   NP_001100965 78
A.gambiae AgaP_AGAP003067 1273741   XP_312753 33
D.melanogaster Cyp304a1 41586   NP_731751 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)