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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRIK2, glutamate receptor, ionotropic, kainate 2
Sequence ID:NM_001166247
NM_021956
NM_175768
RefSeqGene ID:NG_009224
Entrez Gene ID:2898
Ensembl ID:ENSG00000164418

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MENTAL RETARDATION, AUTOSOMAL RECESSIVE, 6 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q16.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 101847153 - 102516386

 Exon Info From UCSC:
NM_001166247
NM_021956
NM_175768

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6189201Full LengthBC063814glutamate receptor, ionotropic, kainate 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_786944  NP_068775  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166247 NP_001159719    
NM_021956 NP_068775 Q13002 Lig_chan
ANF_receptor
NM_175768 NP_786944   Lig_chan
ANF_receptor

Related Sequences

 
mRNAGenPeptSwissProt
U16126 AAC50420 Q13002
BC037954 AAH37954 Q8IY40
BC063814 AAH63814 Q6P3V6
HM149335 ADH93569 Q13002
HM149336 ADH93570 Q13002
HM149337 ADH93571 Q13002
HM149338 ADH93572 Q13002
HM149339 ADH93573 Q13002
JF432691 ADZ15908  
AK289542 BAF82231 A8K0H7
AK291965 BAF84654 A8K7F0
AK303721 BAH14032 B7Z8P6
AJ301608 CAC67485 Q13002
AJ301609 CAC67486 Q13002
AJ301610 CAC67487 Q13002
AJ252246 CAC81020 Q13002

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRIK2 NP_068775 R.norvegicus Grik2 54257   NP_062182 99
M.musculus Grik2 14806 Gene Info NP_001104738 99
A.gambiae AgaP_AGAP012447 1270566   XP_309276 44
A.gambiae AgaP_AGAP000803 1272393   XP_311343 44
D.melanogaster clumsy 35394   NP_001036373 41
C.elegans glr-3 172449   NP_492017 40
C.elegans glr-4 174258   NP_495639 39
A.thaliana GLR2 816231   NP_028351 27
A.thaliana GLR3.3 840859   NP_174978 27
A.thaliana GLUR2 829682   NP_974686 27
A.thaliana GLR3.6 824311   NP_190716 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)