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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NDFIP1, Nedd4 family interacting protein 1
Sequence ID:NM_030571
Entrez Gene ID:80762
Ensembl ID:ENSG00000131507

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 141488387 - 141532339

NM_030571 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1279141488323141488601
280367141511372141511459
368498141511776141511906
499586141515294141515381
587711141517298141517422
712778141520127141520193
779884141524135141524240
8853595141531295141534005

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3628100Full LengthBC004317Nedd4 family interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030571 NP_085048 Q9BT67  

Related Sequences

 
mRNAGenPeptSwissProt
BC004317 AAH04317 Q9BT67
AY192728 AAP13460 Q9BT67
HQ447371 ADQ31857  
AK075495 BAC11652 Q9BT67
AK075524 BAC11670 Q9BT67
AB097010 BAC77363 Q9BT67
AB097037 BAC77390 Q9BT67
AK315481 BAG37865 Q9BT67
AL832993 CAH56294 Q9BT67

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDFIP1 NP_085048 R.norvegicus Ndfip1 291609   NP_001013077 98
M.musculus Ndfip1 65113 Gene Info NP_075372 97
D.melanogaster CG32177 326197   NP_730291 44
A.gambiae AgaP_AGAP005801 4576550   XP_001237719 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)