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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC25A2, solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
Sequence ID:NM_031947
RefSeqGene ID:NG_000012
Entrez Gene ID:83884
Ensembl ID:ENSG00000120329

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140682195 - 140683432

NM_031947 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
21417140682196140683611

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262278Full LengthBC069458solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
40004045Full LengthBC100935solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
40004046Full LengthBC100936solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
40004047Full LengthBC100937solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114153  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031947 NP_114153 Q9BXI2 Mito_carr

Related Sequences

 
mRNAGenPeptSwissProt
BC069458 AAH69458 Q9BXI2
BC100935 AAI00936 Q9BXI2
BC100936 AAI00937 Q9BXI2
BC100937 AAI00938 Q9BXI2
AF332005 AAK26320 Q9BXI2
AF378119 AAM94902 Q9BXI2
AY208943 AAO31753 Q9BXI2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC25A2 NP_114153 S.cerevisiae ORT1 854297   NP_014773 33
N.crassa NCU02802 3880622   XP_964458 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)