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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. H1FOO, H1 histone family, member O, oocyte-specific
Sequence ID:NM_153833
Entrez Gene ID:132243
Ensembl ID:ENSG00000178804

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 129262056 - 129270204

NM_153833 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
193129262056129262148
94383129266233129266522
384747129267843129268206
748812129269587129269651
8131066129269949129270202

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5742122Full LengthBC047943H1 histone family, member O, oocyte-specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_722575  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153833 NP_722575 Q8IZA3 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC047943 AAH47943 Q8IZA3
AY158091 AAN46899 Q8IZA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens H1FOO NP_722575 M.musculus H1foo 171506 Gene Info NP_612184 52
R.norvegicus H1foo 502875   NP_001102821 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)