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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHAD, chondroadherin
Sequence ID:NM_001267
Entrez Gene ID:1101
Ensembl ID:ENSG00000136457

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 48542136 - 48546226

NM_001267 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
195754854185348542409
5767214854265448542799
7228854854306748543230
88617124854540048546226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5163623Full LengthBC036360chondroadherin
5730623Full LengthBC073974chondroadherin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001258  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001267 NP_001258 O15335 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC036360 AAH36360 O15335
BC073974 AAH73974 O15335
AF371328 AAK51556 O15335
JF432155 ADZ15372  
AK292177 BAF84866 O15335

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHAD NP_001258 M.musculus Chad 12643 Gene Info NP_031715 94
R.norvegicus Chad 29195   NP_062037 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)