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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD93, CD93 molecule
Sequence ID:NM_012072
Entrez Gene ID:22918
Ensembl ID:ENSG00000125810

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 23062986 - 23066956

NM_012072 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
246192305999323064610
462067012306489523066976

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5216061Full LengthBC028075CD93 molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036204  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012072 NP_036204 Q9NPY3 EGF
Lectin_C
Tissue_fac
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
U94333 AAB53110 Q9NPY3
BC028075 AAH28075 Q9NPY3
DQ891055 ABM81981  
DQ894234 ABM85160  
AB209895 BAD93132 Q59EB6
AK299957 BAG61784 B4DSX2
AJ295142 CAC82720 Q8IXK1
AM393282 CAL38160  
AM393752 CAL38627  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD93 NP_036204 M.musculus Cd93 17064 Gene Info NP_034870 69
R.norvegicus Cd93 84398   NP_445835 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)