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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C11orf20, Chromosome 11 open reading frame 20
Sequence ID:NM_001039496
Entrez Gene ID:25858
Ensembl ID:ENSG00000219435

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64067862 - 64072239

NM_001039496 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1416406786264067902
423726406812864068458
3734526407095364071032
4535196407124464071310
5207436407201464072237

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039496 NP_001034585 Q9NTU4  

Related Sequences

 
mRNAGenPeptSwissProt
AL117564 CAB55995 Q9NTU4
AM392988 CAL37866  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C11orf20 NP_001034585 R.norvegicus LOC100362120 100362120   XP_002728873 51
M.musculus 1700019N12Rik 67077 Gene Info NP_001034583 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)