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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C11orf52, Chromosome 11 open reading frame 52
Sequence ID:NM_080659
RefSeqGene ID:NG_009824
Entrez Gene ID:91894
Ensembl ID:ENSG00000149300

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 111789662 - 111797594

NM_080659 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1128111789600111789727
129166111795049111795086
167228111796376111796437
2291135111796683111797589

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4294167Full LengthBC008501chromosome 11 open reading frame 52
6193385Full LengthBC110872chromosome 11 open reading frame 52

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080659 NP_542390 Q96A22  

Related Sequences

 
mRNAGenPeptSwissProt
BC008501 AAH08501 Q96A22
BC110872 AAI10873 Q96A22
AK057948 BAB71620 Q96A22
AK293041 BAF85730 A8KAH6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C11orf52 NP_542390 R.norvegicus LOC689959 689959   NP_001103029 66
M.musculus 2310030G06Rik 66952 Gene Info NP_080141 65