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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HNRNPA0, heterogeneous nuclear ribonucleoprotein A0
Sequence ID:NM_006805
Entrez Gene ID:10949
Ensembl ID:ENSG00000177733

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137088509 - 137090052

NM_006805 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192983137087074137090038

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823669Full LengthBC019271heterogeneous nuclear ribonucleoprotein A0
2964662Full LengthBC001008heterogeneous nuclear ribonucleoprotein A0
3160840Full LengthBC007271heterogeneous nuclear ribonucleoprotein A0
3454140Full LengthBC011972heterogeneous nuclear ribonucleoprotein A0
3617551Full LengthBC012980heterogeneous nuclear ribonucleoprotein A0
4131137Full LengthBC018949heterogeneous nuclear ribonucleoprotein A0
4299262Full LengthBC009284heterogeneous nuclear ribonucleoprotein A0
4993025Full LengthBC028976heterogeneous nuclear ribonucleoprotein A0
5242912Full LengthBC030249heterogeneous nuclear ribonucleoprotein A0

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006796  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006805 NP_006796 Q13151 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U23803 AAA65094 Q13151
BC001008 AAH01008 Q13151
BC007271 AAH07271 Q13151
BC009284 AAH09284 Q13151
BC011972 AAH11972 Q13151
BC012980 AAH12980 Q13151
BC018949 AAH18949 Q13151
BC019271 AAH19271 Q13151
BC028976 AAH28976 Q13151
BC030249 AAH30249 Q13151
CR456986 CAG33267 Q13151

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HNRNPA0 NP_006796 R.norvegicus LOC681410 681410   XP_001061632 95
M.musculus Hnrnpa0 77134 Gene Info NP_084148 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)