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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EDC3, enhancer of mRNA decapping 3 homolog (S. cerevisiae)
Sequence ID:NM_001142443
NM_001142444
NM_025083
Entrez Gene ID:80153
Ensembl ID:ENSG00000179151

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 74924889 - 74988334

 Exon Info From UCSC:
NM_001142443
NM_001142444
NM_025083

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3875364Full LengthBC011534enhancer of mRNA decapping 3 homolog (S. cerevisiae)
4811016Full LengthBC021271enhancer of mRNA decapping 3 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142443 NP_001135915    
NM_001142444 NP_001135916    
NM_025083 NP_079359 Q96F86 YjeF_N

Related Sequences

 
mRNAGenPeptSwissProt
AF193058 AAG22486 Q96F86
BC011534 AAH11534 Q96F86
BC021271 AAH21271 Q96F86
AK024781 BAB15001 Q96F86
AK056339 BAG51682 Q96F86

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EDC3 NP_001135916 M.musculus Edc3 353190 Gene Info NP_722494 96
R.norvegicus Lsm16 315708   XP_002729954 93
D.melanogaster Edc3 39957   NP_648992 38
A.gambiae AgaP_AGAP003131 1273803   XP_312817 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)