Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TAF5, TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
Sequence ID:NM_006951
Entrez Gene ID:6877
Ensembl ID:ENSG00000148835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24-q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 105127737 - 105148669

 Exon Info From UCSC:
NM_006951

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6575596Full LengthBC052268TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
9020327Full LengthBC136340TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
9020335Full LengthBC136348TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008882  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006951 NP_008882 Q15542 WD40
TFIID_90kDa

Related Sequences

 
mRNAGenPeptSwissProt
U75309 AAC50902 Q15542
U80191 AAC51215 Q15542
BC052268 AAH52268 Q15542
BC136340 AAI36341 Q15542
BC136348 AAI36349 Q15542
AK223615 BAD97335 Q15542
AK291229 BAF83918 Q15542
X95525 CAA64777 Q15542

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF5 NP_008882 M.musculus Taf5 226182 Gene Info NP_796316 97
R.norvegicus Taf5 294018   NP_001099835 97
A.gambiae AgaP_AGAP011678 1280962   XP_320836 54
D.melanogaster Taf5 47900   NP_476957 45
A.thaliana TAF5 832586   NP_197897 42
S.pombe taf5 2539353   NP_587902 41
S.cerevisiae TAF5 852497   NP_009757 38
C.elegans taf-5 172552   NP_492169 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)