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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IL9, interleukin 9
Sequence ID:NM_000590
Entrez Gene ID:3578
Ensembl ID:ENSG00000145839

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 135228072 - 135231516

NM_000590 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1265135227934135228198
266397135229708135229839
398430135231128135231160
431466135231243135231278
467591135231391135231515

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6971717Full LengthBC066283interleukin 9
6971718Full LengthBC066284interleukin 9
6971719Full LengthBC066285interleukin 9
6971720Full LengthBC066286interleukin 9
6971721Full LengthBC066287interleukin 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000581  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000590 NP_000581 P15248 IL7

Related Sequences

 
mRNAGenPeptSwissProt
M30134 AAA36400 P15248
S63356 AAB19823 P15248
BC066283 AAH66283 P15248
BC066284 AAH66284 Q6NZ75
BC066285 AAH66285 P15248
BC066286 AAH66286 P15248
BC066287 AAH66287 Q6NZ74
X17543 CAA35581 P15248

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IL9 NP_000581 R.norvegicus Il9 116558   NP_001099217 58
M.musculus Il9 16198 Gene Info NP_032399 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta