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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PMEL, premelanosome protein
Sequence ID:NM_001200053
NM_001200054
NM_006928
RefSeqGene ID:NG_028086
Entrez Gene ID:6490
Ensembl ID:ENSG00000185664

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13-q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56347889 - 56360458


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3139788Full LengthBC001414silver homolog (mouse)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001200053 NP_001186982    
NM_001200054 NP_001186983    
NM_006928 NP_008859 P40967 PKD

Related Sequences

 
mRNAGenPeptSwissProt
U01874 AAA18479 P40967
M32295 AAA35930 P40967
M77348 AAA60121 P40967
S73003 AAC60634 P40967
BC001414 AAH01414 P40967
BT007202 AAP35866 P40967
EU176186 ABW03637  
AK092881 BAG52619 P40967
AK300150 BAH13223 P40967

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PMEL NP_001186983 R.norvegicus Pmel 362818   NP_001102199 81
M.musculus Pmel 20431 Gene Info NP_068682 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)