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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UBQLN1, ubiquilin 1
Sequence ID:NM_013438
NM_053067
RefSeqGene ID:NG_011519
Entrez Gene ID:29979
Ensembl ID:ENSG00000135018

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22|9q21.2-q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 86275803 - 86322703

 Exon Info From UCSC:
NM_013438
NM_053067

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4110398Full LengthBC010066ubiquilin 1
5263680Full LengthBC039294ubiquilin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444295  NP_038466  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013438 NP_038466 Q9UMX0 ubiquitin
UBA
NM_053067 NP_444295   ubiquitin
UBA

Related Sequences

 
mRNAGenPeptSwissProt
AF176069 AAD49751 Q9UMX0
AF293384 AAG02473 Q9UMX0
BC010066 AAH10066 Q9UMX0
BC039294 AAH39294 Q9UMX0
AB035275 BAB20436 Q9UMX0
AB209468 BAD92705 Q59FJ2
AK027556 BAG51344 B3KNI2
AK027576 BAG51350 B3KNI8
AL136643 CAB66578 Q9UMX0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBQLN1 NP_038466 M.musculus Ubqln1 56085 Gene Info NP_081118 91
R.norvegicus Ubqln1 114590   NP_446199 89
D.melanogaster Ubqn 32977   NP_608344 56
A.gambiae AgaP_AGAP004294 1274444   XP_313568 52
C.elegans F15C11.2 172434   NP_740883 44
A.thaliana AT2G17190 816224   NP_565407 42
A.thaliana DSK2 816225   NP_179311 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta