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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPP38, ribonuclease P/MRP 38kDa subunit
Sequence ID:NM_001097590
NM_001265601
NM_006414
NM_183005
Entrez Gene ID:10557
Ensembl ID:ENSG00000152464

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 15139622 - 15144336

 Exon Info From UCSC:
NM_001097590
NM_006414
NM_183005

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5271044Full LengthBC029494ribonuclease P/MRP 38kDa subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_892117  NP_006405  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001097590 NP_001091059      
NM_001265601 NP_001252530      
NM_006414 NP_006405     Ribosomal_L7Ae
NM_183005 NP_892117 P78345 EC 3.1.26.5 Ribosomal_L7Ae

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U77664 AAC51142 P78345 EC 3.1.26.5
BC029494 AAH29494 P78345 EC 3.1.26.5
HQ447162 ADQ31649    
AK223418 BAD97138 P78345 EC 3.1.26.5
AK057006 BAG51842 P78345 EC 3.1.26.5
CR541816 CAG46615 P78345 EC 3.1.26.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPP38 NP_001091059 M.musculus Rpp38 227522 Gene Info NP_001013394 78
R.norvegicus Rpp38 291317   NP_001028235 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)