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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. BLOC1S1, biogenesis of lysosomal organelles complex-1, subunit 1
Sequence ID:NR_037656
NR_037657
NM_001487
NR_037655
RefSeqGene ID:NG_008606
Entrez Gene ID:2647
Ensembl ID:ENSG00000135441

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13-q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56109821 - 56113871

NM_001487 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11615610981956109979
1622345611071656110788
2353675611287456113006
3685725611328256113486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146671Full LengthBC130640biogenesis of lysosomal organelles complex-1, subunit 1
40146817Full LengthBC132795biogenesis of lysosomal organelles complex-1, subunit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001478  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001487 NP_001478 P78537 GCN5L1

Related Sequences

 
mRNAGenPeptSwissProt
S82447 AAB37682 P78537
BC130640 AAI30641 P78537
BC132795 AAI32796 P78537
D64007 BAA10887 P78537

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BLOC1S1 NP_001478 R.norvegicus Bloc1s1 288785   NP_001099411 100
M.musculus Bloc1s1 14533 Gene Info NP_056555 99
A.gambiae AgaP_AGAP001887 1281235   XP_321175 65
D.melanogaster blos1 246439   NP_725401 58
C.elegans T20G5.10 176435   NP_499262 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)