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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LPHN1, latrophilin 1
Sequence ID:NM_001008701
NM_014921
Entrez Gene ID:22859
Ensembl ID:ENSG00000072071

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 14260752 - 14316997

 Exon Info From UCSC:
NM_001008701
NM_014921

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068274Full LengthBC168378latrophilin 1
3162852IncompleteBC007587latrophilin 1
3535311IncompleteBC002974latrophilin 1
3870835IncompleteBC019928latrophilin 1
3941767IncompleteBC013275latrophilin 1
4914948IncompleteBC028296latrophilin 1
6164943IncompleteBC072445latrophilin 1
6670989IncompleteBC052627latrophilin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008701  NP_055736  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008701 NP_001008701 O94910 7tm_2
GPS
Gal_Lectin
OLF
Latrophilin
HRM
NM_014921 NP_055736   7tm_2
GPS
Gal_Lectin
OLF
Latrophilin
HRM

Related Sequences

 
mRNAGenPeptSwissProt
AF307079 AAG27461 O94910
BC002974 AAH02974 O94910
BC007587 AAH07587 O94910
BC028296 AAH28296 A0PJG2
BC168378 AAI68378  
AB020628 BAA74844 O94910
AK022001 BAB13950 Q9HAA0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LPHN1 NP_001008701 R.norvegicus Lphn1 65096   NP_075251 98
M.musculus Lphn1 330814 Gene Info NP_851382 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)