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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DFNB31, deafness, autosomal recessive 31
Sequence ID:NM_001083885
NM_001173425
NM_015404
RefSeqGene ID:NG_016700
Entrez Gene ID:25861
Ensembl ID:ENSG00000095397

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DEAFNESS, AUTOSOMAL RECESSIVE 31 
USHER SYNDROME, TYPE2D 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 117164360 - 117267250

 Exon Info From UCSC:
NM_001083885
NM_001173425
NM_015404

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020404Full LengthBC136416deafness, autosomal recessive 31
40147287Full LengthBC142614deafness, autosomal recessive 31
40148465Full LengthBC142684deafness, autosomal recessive 31
3834205IncompleteBC014524deafness, autosomal recessive 31
4310443IncompleteBC011918deafness, autosomal recessive 31

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056219  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083885 NP_001077354    
NM_001173425 NP_001166896    
NM_015404 NP_056219 Q9P202 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC136416 AAI36417 B9EGE6
BC142614 AAI42615 Q9P202
BC142684 AAI42685 Q9P202
AB040959 BAA96050 Q9P202
AK022854 BAB14275 Q9P202
AL110228 CAB53685 Q9P202

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DFNB31 NP_056219 M.musculus Whrn 73750 Gene Info NP_001008792 89
R.norvegicus Dfnb31 313255   NP_851602 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)