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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFR1, SWI5-dependent recombination repair 1
Sequence ID:NM_145247
NM_001002759
Entrez Gene ID:119392
Ensembl ID:ENSG00000156384

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 105880876 - 105886134

 Exon Info From UCSC:
NM_145247
NM_001002759

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021703Full LengthBC140835chromosome 10 open reading frame 78
4694255IncompleteBC020892chromosome 10 open reading frame 78
5258836IncompleteBC047587chromosome 10 open reading frame 78

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002759 NP_001002759 Q86XK3  
NM_145247 NP_660290    

Related Sequences

 
mRNAGenPeptSwissProt
BC020892 AAH20892 Q86XK3
BC140835 AAI40836 Q86XK3
AK291184 BAF83873 Q86XK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFR1 NP_001002759 R.norvegicus Sfr1 294030   NP_001041321 64
M.musculus Sfr1 67788 Gene Info NP_080653 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)