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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXD3, homeobox D3
Sequence ID:NM_006898
Entrez Gene ID:3232
Ensembl ID:ENSG00000128652

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 177028804 - 177037826

NM_006898 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192177028804177028895
93717177033758177034382
7182299177036244177037825

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3628279Full LengthBC008789homeobox D3
3936607Full LengthBC005124homeobox D3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008829  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006898 NP_008829 P31249 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC005124 AAH05124 P31249
BC008789 AAH08789 P31249
DQ892974 ABM83900  
DQ896222 ABM87221  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXD3 NP_008829 R.norvegicus Hoxd3 288152   XP_213633 97
M.musculus Hoxd3 15434 Gene Info NP_034598 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)