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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GUCA1A, guanylate cyclase activator 1A (retina)
Sequence ID:NM_000409
RefSeqGene ID:NG_009938
Entrez Gene ID:2978
Ensembl ID:ENSG00000048545

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42123183 - 42147792

NM_000409 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11884212314342123330
1893644213065742130832
3658464214107042141551
8479964214601742146166
99710904214653942146632
109119024214698042147791

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5172128Full LengthBC031663guanylate cyclase activator 1A (retina)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000400  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000409 NP_000400 P43080 efhand

Related Sequences

 
mRNAGenPeptSwissProt
L36859 AAA60541 P43080
BC031663 AAH31663 P43080
DQ891302 ABM82228  
DQ894487 ABM85413  
AK313865 BAG36593 B2R9P6
AK125780 BAG54246 P43080

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GUCA1A NP_000400 R.norvegicus Guca1a 301233   NP_001100357 94
M.musculus Guca1a 14913 Gene Info NP_032215 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta