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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH10, cadherin 10, type 2 (T2-cadherin)
Sequence ID:NM_006727
NM_001190450
Entrez Gene ID:1008
Ensembl ID:ENSG00000040731

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 24487209 - 24644911

 Exon Info From UCSC:
NM_006727
NM_001190450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062584Full LengthBC156818cadherin 10, type 2 (T2-cadherin)
100016083BC152828cadherin 10, type 2 (T2-cadherin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006718  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006727 NP_006718 Q9Y6N8 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC152828 AAI52829  
BC156818 AAI56819  
AB035303 BAA87417 Q9Y6N8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH10 NP_006718 M.musculus Cdh10 320873 Gene Info NP_033995 97
R.norvegicus Cdh10 29181   NP_001162102 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)