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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RABIF, RAB interacting factor
Sequence ID:NM_002871
Entrez Gene ID:5877
Ensembl ID:ENSG00000183155

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 202850067 - 202858385

NM_002871 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
262289202848087202850350
22902452202858100202858262

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4475846Full LengthBC018488RAB interacting factor
5191960Full LengthBC037392RAB interacting factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002862  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002871 NP_002862 P47224 Mss4

Related Sequences

 
mRNAGenPeptSwissProt
U74324 AAB18264 P47224
S78873 AAB34955 P47224
BC018488 AAH18488 P47224
BC037392 AAH37392 P47224
BT007133 AAP35797 P47224
AK223538 BAD97258 Q53EV1
AK311900 BAG34841 P47224

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RABIF NP_002862 M.musculus Rabif 98710 Gene Info NP_663485 93
R.norvegicus RGD1563962 499636   XP_574959 92
R.norvegicus Rabif 304807   NP_001007679 92
A.gambiae AgaP_AGAP008798 1275656   XP_314924 43
D.melanogaster CG7787 34142   NP_609209 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)