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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HTATIP2, HIV-1 Tat interactive protein 2, 30kDa
Sequence ID:NM_001098520
NM_001098521
NM_001098522
NM_001098523
NM_006410
Entrez Gene ID:10553
Ensembl ID:ENSG00000109854

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 20385778 - 20405324

 Exon Info From UCSC:
NM_001098520
NM_001098521
NM_001098522
NM_001098523
NM_006410

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346984Full LengthBC002439HIV-1 Tat interactive protein 2, 30kDa
3455757Full LengthBC015358HIV-1 Tat interactive protein 2, 30kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098520 NP_001091990    
NM_001098521 NP_001091991    
NM_001098522 NP_001091992    
NM_001098523 NP_001091993    
NM_006410 NP_006401 Q9BUP3  

Related Sequences

 
mRNAGenPeptSwissProt
U69161 AAB84360 Q9BUP3
AF039103 AAC39694 Q9BUP3
AF092095 AAC78331 Q9BUP3
BC002439 AAH02439 Q9BUP3
BC015358 AAH15358 Q9BUP3
EU446982 ABZ92511  
AK222969 BAD96689 Q9BUP3
AK223010 BAD96730 Q9BUP3
AK292092 BAF84781 Q9BUP3
CR456821 CAG33102 Q9BUP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTATIP2 NP_001091990 R.norvegicus Htatip2 292935   NP_001099733 89
M.musculus Htatip2 53415 Gene Info NP_058561 85
C.elegans C33F10.14 6418622   NP_001022013 44
S.cerevisiae FMP52 856721   NP_010919 37
N.crassa NCU03908 3873701   XP_957547 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)