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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT23, Keratin 23 (histone deacetylase inducible)
Sequence ID:NM_015515
RefSeqGene ID:NG_012287
Entrez Gene ID:25984
Ensembl ID:ENSG00000108244

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39081857 - 39082415

NM_015515 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
174003907895139079334
4014323908072339080754
4336533908160539081825
6547763908448939084611
7779383908469739084858
93910953908619139086347
109611783908762439087706
117919243909245939093204
192521633909359739093835

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4838347Full LengthBC028356keratin 23 (histone deacetylase inducible)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015515 NP_056330 Q9C075  

Related Sequences

 
mRNAGenPeptSwissProt
BC028356 AAH28356 Q8TC04
AF102848 AAK00050 Q9C075
DQ891640 ABM82566  
DQ894829 ABM85755  
AK002047 BAA92054 Q9C075
AK289449 BAF82138 Q9C075
AK314604 BAG37174 B2RBC7
AK302109 BAH13628 B7Z7J2
AL117538 CAB55984 Q9UFN7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT23 NP_056330 R.norvegicus Krt23 287678   NP_001008753 80
M.musculus Krt23 94179 Gene Info NP_203537 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)