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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSPA4, heat shock 70kDa protein 4
Sequence ID:NM_198431
NM_002154
Entrez Gene ID:3308
Ensembl ID:ENSG00000170606

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 132387669 - 132440165


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6169048Full LengthBC110861heat shock 70kDa protein 4
8991838Full LengthBC126122heat shock 70kDa protein 4
8991840Full LengthBC126124heat shock 70kDa protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002145  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002154 NP_002145 P34932 HSP70

Related Sequences

 
mRNAGenPeptSwissProt
L12723 AAA02807 P34932
BC002526 AAH02526 Q9BUK9
BC110861 AAI10862 P34932
BC126122 AAI26123 P34932
BC126124 AAI26125 P34932
BT007375 AAP36039 Q9BUK9
HQ258526 ADR83280  
AB023420 BAA75062 P34932
AB209151 BAD92388 Q59GF8
AK315862 BAF98753 B0AZS1
AK315871 BAF98762 B0AZT0
AK315875 BAF98766 B0AZT0
AK315887 BAF98778 B0AZU6
AK294859 BAG57963 B4DH02
AK295847 BAG58655 B4DIZ3
AK297762 BAG60110 B4DN48
AK299710 BAG61610 B4DSE8
AK300050 BAG61859 B4DT47
AK300770 BAG62435 B4DUS3
AK303382 BAG64438 B4E0H6
AK304578 BAG65366 B4E354
X67643 CAA47886 O14992

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSPA4 NP_002145 R.norvegicus Hspa4 266759   NP_705893 96
M.musculus Hspa4 15525 Gene Info NP_032326 96
S.pombe pss1 3361514   NP_001018245 46
N.crassa NCU05269 3877907   XP_961759 43
A.thaliana HSP91 844333   NP_178111 42
S.cerevisiae SSE1 855998   NP_015219 41
A.thaliana AT1G79920 844332   NP_178110 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)