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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PGRMC1, progesterone receptor membrane component 1
Sequence ID:NM_006667
RefSeqGene ID:NG_016756
Entrez Gene ID:10857
Ensembl ID:ENSG00000101856

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 118370287 - 118378428

NM_006667 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1444118370210118370653
445600118374271118374426
6011915118377113118378427

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3863377Full LengthBC034238progesterone receptor membrane component 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006658  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006667 NP_006658 O00264
Q6IB11
Cyt-b5

Related Sequences

 
mRNAGenPeptSwissProt
BC034238 AAH34238 O00264
Q6IB11
DQ891774 ABM82700  
DQ894958 ABM85884  
AK313956 BAG36672 Q6IB11
AK293618 BAH11549 B7Z1L3
Y12711 CAA73248 O00264
Q6IB11
CR456993 CAG33274 O00264
Q6IB11

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGRMC1 NP_006658 M.musculus Pgrmc1 53328 Gene Info NP_058063 95
R.norvegicus Pgrmc1 291948   NP_068534 88
A.gambiae AgaP_AGAP000767 1272357   XP_311303 58
D.melanogaster MSBP 32548   NP_001162765 56
S.cerevisiae DAP1 855933   NP_015155 49
N.crassa NCU07286 3878289   XP_962140 48
S.pombe dap1 2542688   NP_594461 48
C.elegans vem-1 181066   NP_001024769 43
A.thaliana MAPR3 824050   NP_190458 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)