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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CXCL5, chemokine (C-X-C motif) ligand 5
Sequence ID:NM_002994
Entrez Gene ID:6374
Ensembl ID:ENSG00000163735

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 74861358 - 74862455

NM_002994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1920317486135974863371
203221157486372874863811
211622487486392274864054
224924757486418974864415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3826939Full LengthBC008376chemokine (C-X-C motif) ligand 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002985  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002994 NP_002985 Q6I9S7
P42830
IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC008376 AAH08376 Q6I9S7
P42830
BT006807 AAP35453 Q6I9S7
P42830
DQ895547 ABM86473  
EU176356 ABW03807  
AK312128 BAG35064 Q6I9S7
X78686 CAA55355 Q6I9S7
P42830
CR457428 CAG33709 Q6I9S7
P42830

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)