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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CXCL3, chemokine (C-X-C motif) ligand 3
Sequence ID:NM_002090
Entrez Gene ID:2921
Ensembl ID:ENSG00000163734

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 74903126 - 74904407

NM_002090 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
166967490231374902993
6977807490380974903892
7819047490400674904129
90511667490422874904489

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4070983Full LengthBC016308chemokine (C-X-C motif) ligand 3
4717346Full LengthBC065743chemokine (C-X-C motif) ligand 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002081  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002090 NP_002081 P19876 IL8

Related Sequences

 
mRNAGenPeptSwissProt
M36821 AAA63184 P19876
BC016308 AAH16308 P19876
BC065743 AAH65743 P19876
EU176452 ABW03903  
EU831569 ACE86488  
EU831482 ACE87169  
X53800 CAA37809 P19876

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCL3 NP_002081 M.musculus Cxcl2 20310 Gene Info NP_033166 65
R.norvegicus Cxcl2 114105   NP_446099 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)