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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PTPRN, protein tyrosine phosphatase, receptor type, N
Sequence ID:NM_001199763
RefSeqGene ID:NG_029546
Entrez Gene ID:5798
Ensembl ID:ENSG00000054356

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35-q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 220154346 - 220164981

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5312712Full LengthBC070053protein tyrosine phosphatase, receptor type, N
4130827IncompleteBC007713protein tyrosine phosphatase, receptor type, N

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002837  

Protein Infomation

NM_001199763 NP_001186692    
NM_001199764 NP_001186693    
NM_002846 NP_002837 Q16849 Y_phosphatase

Related Sequences

L18983 AAA90974 Q16849
BC007713 AAH07713 Q96IA0
BC070053 AAH70053 Q16849
BT006975 AAP35621 Q7KZS4
AB209368 BAD92605 Q59FU1
AK291469 BAF84158 A8K604
AK122679 BAG53662 B3KV50
AK294490 BAG57712 B4DGA1
AK296335 BAG59024 B4DK12
X62899 CAA44688 Q7KZS4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PTPRN NP_002837 M.musculus Ptprn 19275 Gene Info NP_033011 88
R.norvegicus Ptprn 116660   NP_446333 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)