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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TKT, transketolase
Sequence ID:NM_001064
NM_001135055
NM_001258028
NR_047580
NM_001135056
NR_047579
RefSeqGene ID:NG_027815
Entrez Gene ID:7086
Ensembl ID:ENSG00000163931

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 53259663 - 53290038

 Exon Info From UCSC:
NM_001064
NM_001135055

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346980Full LengthBC002433transketolase
4310396Full LengthBC009970transketolase
2966643IncompleteBC024026transketolase
4156339IncompleteBC008615transketolase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001055  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001064 NP_001055 P29401 EC 2.2.1.1 Transketolase_N
Transket_pyr
Transketolase_C
NM_001135055 NP_001128527      
NM_001258028 NP_001244957      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L12711 AAA61222 P29401 EC 2.2.1.1
U55017 AAA98961 P29401 EC 2.2.1.1
BC002433 AAH02433    
BC008615 AAH08615 P29401 EC 2.2.1.1
BC009970 AAH09970 P29401 EC 2.2.1.1
BC024026 AAH24026 P29401 EC 2.2.1.1
DQ893078 ABM84004    
EU176764 ABW03565    
AK223614 BAD97334 Q53EM5  
AK289454 BAF82143 P29401 EC 2.2.1.1
AK057092 BAG51860 B3KPZ8  
AK093667 BAG52746 B3KSI4  
AK293438 BAG56942 B4DE31  
AK301231 BAG62803 B4DVU1  
AK303191 BAG64284 B4E022  
X67688 CAA47919 P29401 EC 2.2.1.1
BX649193 CAE46212 Q6MZE3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TKT NP_001055 M.musculus Tkt 21881 Gene Info NP_033414 95
R.norvegicus Tkt 64524   NP_072114 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)