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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHRNA3, cholinergic receptor, nicotinic, alpha 3 (neuronal)
Sequence ID:NM_000743
NM_001166694
NR_046313
RefSeqGene ID:NG_016143
Entrez Gene ID:1136
Ensembl ID:ENSG00000080644

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LUNG CANCER SUSCEPTIBILITY 2CHRNA5
CHRNA5

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78888978 - 78913120

 Exon Info From UCSC:
NM_000743
NM_001166694

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822768Full LengthBC000513cholinergic receptor, nicotinic, alpha 3
2822768Full LengthBC001642cholinergic receptor, nicotinic, alpha 3
2822768Full LengthBC002996cholinergic receptor, nicotinic, alpha 3
3503197Full LengthBC006114cholinergic receptor, nicotinic, alpha 3
3508233Full LengthBC098443cholinergic receptor, nicotinic, alpha 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000734  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000743 NP_000734 P32297 Neur_chan_LBD
Neur_chan_memb
NM_001166694 NP_001160166    

Related Sequences

 
mRNAGenPeptSwissProt
M37981 AAA59942 P32297
U62432 AAB40110 P32297
BC000513 AAH00513 P32297
BC001642 AAH01642 P32297
BC002996 AAH02996 P32297
BC006114 AAH06114 P32297
BC098443 AAH98443 P32297
AF385584 AAK68110 P32297
BT006646 AAP35292 P32297
BT006897 AAP35543 P32297
AK298195 BAG60465 B4DP53
X53559 CAA37625 P32297
Y08418 CAA69695 P32297
AJ584707 CAE48369 Q6EWN2
AJ584708 CAE48370 Q6EWN2
AJ584709 CAE48371 Q6EWN2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRNA3 NP_000734 M.musculus Chrna3 110834 Gene Info NP_660111 93
R.norvegicus Chrna3 25101   NP_434692 93
D.melanogaster nAcRalpha-80B 40521   NP_001097669 49
A.gambiae AgaP_AGAP000138 1272129   XP_311007 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)