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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCOLCE2, Procollagen C-endopeptidase enhancer 2
Sequence ID:NM_013363
Entrez Gene ID:26577
Ensembl ID:ENSG00000163710

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 142536715 - 142607771

NM_013363 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19623142536702142537306
624791142539719142539886
792875142542373142542456
8761030142548533142548687
10311167142557611142557747
11681292142561765142561889
12931548142567058142567313
15491657142606510142606618
16582047142607655142608044

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3951739IncompleteBC006265procollagen C-endopeptidase enhancer 2
100015983BC152796procollagen C-endopeptidase enhancer 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037495  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013363 NP_037495 Q9UKZ9 CUB
NTR

Related Sequences

 
mRNAGenPeptSwissProt
AF098269 AAF04621 Q9UKZ9
BC152796 AAI52797  
AY035400 AAK63128 Q9UKZ9
AY358557 AAQ88921 Q9UKZ9
AK223633 BAD97353 Q53EK6
AK315121 BAG37576 Q9UKZ9
AK075478 BAG52150 B3KQT8
CR536570 CAG38807 Q9UKZ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCOLCE2 NP_037495 M.musculus Pcolce2 76477 Gene Info NP_083896 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)