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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VSIG4, V-set and immunoglobulin domain containing 4
Sequence ID:NM_001100431
NM_001184830
NM_001184831
NM_001257403
NM_007268
RefSeqGene ID:NG_021306
Entrez Gene ID:11326
Ensembl ID:ENSG00000155659

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq12-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 65241579 - 65259885

 Exon Info From UCSC:
NM_001100431
NM_001184830
NM_001184831
NM_007268

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4151604Full LengthBC010525V-set and immunoglobulin domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009199  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100431 NP_001093901    
NM_001184830 NP_001171759    
NM_001184831 NP_001171760    
NM_001257403 NP_001244332    
NM_007268 NP_009199 Q9Y279 ig
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC010525 AAH10525 Q9Y279
AY358341 AAQ88707 Q9Y279
DQ891770 ABM82696  
DQ894953 ABM85879  
AK075153 BAG52076  
AK293215 BAG56754  
AK297050 BAG59576  
AK298389 BAG60624  
AK301417 BAG62947  
AJ132502 CAB51536 Q9Y279

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VSIG4 NP_009199 M.musculus Vsig4 278180 Gene Info NP_808457 65
R.norvegicus Vsig4 312102   NP_001020175 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)