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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLC, Charcot-Leyden crystal protein
Sequence ID:NM_001828
Entrez Gene ID:1178
Ensembl ID:ENSG00000105205

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 40221972 - 40228620

NM_001828 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
132624022189540222144
2634734022492240225132
4745504022563640225712
5516414022857740228667

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117193Full LengthBC119711Charcot-Leyden crystal protein
40117194Full LengthBC119712Charcot-Leyden crystal protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001819  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001828 NP_001819 Q05315 EC 3.1.1.5 Gal-bind_lectin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L01664 AAA36190 Q05315 EC 3.1.1.5
BC119711 AAI19712 Q05315 EC 3.1.1.5
BC119712 AAI19713 Q05315 EC 3.1.1.5
FJ613334 ACR09636 C5HZ13  
FJ613335 ACR09637 C5HZ14  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)