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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PNOC, Prepronociceptin
Sequence ID:NM_006228
Entrez Gene ID:5368
Ensembl ID:ENSG00000168081

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 28174785 - 28197480

NM_006228 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11852817464828174832
1863342818665128186799
3357862819655628197007
78711942820045828200865

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5195392Full LengthBC034758prepronociceptin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006219  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006228 NP_006219 Q13519 Opiods_neuropep

Related Sequences

 
mRNAGenPeptSwissProt
U48263 AAC50651 Q13519
BC034758 AAH34758 Q13519
AY335948 AAP94601 Q13519
BT019334 AAV38141 Q13519
DQ891296 ABM82222  
DQ894480 ABM85406  
AK289633 BAF82322 A8K0R8
X97370 CAA66040 Q13519
CR541940 CAG46738 Q13519
CR541965 CAG46763 Q13519

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PNOC NP_006219 M.musculus Pnoc 18155 Gene Info NP_035062 82
R.norvegicus Pnoc 25516   NP_037139 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)