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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SIT1, signaling threshold regulating transmembrane adaptor 1
Sequence ID:NM_014450
Entrez Gene ID:27240
Ensembl ID:ENSG00000137078

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 35649294 - 35650937

NM_014450 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
37843564929635650077
7858463565018035650241
8479053565035335650411
90610413565049835650633
104212383565075035650946

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40031396Full LengthBC102029signaling threshold regulating transmembrane adaptor 1
40031398Full LengthBC107484signaling threshold regulating transmembrane adaptor 1
40031403Full LengthBC104491signaling threshold regulating transmembrane adaptor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014450 NP_055265 Q9Y3P8  

Related Sequences

 
mRNAGenPeptSwissProt
BC102029 AAI02030 Q9Y3P8
BC104491 AAI04492 Q9Y3P8
BC107484 AAI07485 Q9Y3P8
JQ924063 AFK32776 I3RY38
AK314758 BAG37296 Q9Y3P8
AJ010059 CAB41504 Q9Y3P8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SIT1 NP_055265 M.musculus Sit1 54390 Gene Info NP_062309 78
R.norvegicus Sit1 500449   NP_001019515 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)