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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLR9, toll-like receptor 9
Sequence ID:NM_017442
NM_138688
Entrez Gene ID:54106
Ensembl ID:ENSG00000239732

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 52255180 - 52259651

Transcript StartTranscript EndChromosomal Start Chromosomal End
132315225509752258327
323238685225954252260178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5495717Full LengthBC032713toll-like receptor 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059138  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017442 NP_059138 Q9NR96 LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
AF259262 AAF72189 Q9NR96
AF259263 AAF72190 Q9NR96
AF245704 AAF78037 Q9NR96
AF246972 AAG01734 Q9NR96
BC032713 AAH32713 Q9NR96
AY359085 AAQ89443 Q9NR96
EU831898 ACE86657  
EU831821 ACE87339  
AB045180 BAB19259 Q9NR96
AB445673 BAG55070 Q9NR96

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLR9 NP_059138 M.musculus Tlr9 81897 Gene Info NP_112455 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)