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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGEF16, Rho guanine nucleotide exchange factor (GEF) 16
Sequence ID:NM_014448
Entrez Gene ID:27237
Ensembl ID:ENSG00000130762

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 3389332 - 3397675

 Exon Info From UCSC:
NM_014448

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3613623Full LengthBC002681Rho guanine exchange factor (GEF) 16
6191377Full LengthBC051838Rho guanine exchange factor (GEF) 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055263  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014448 NP_055263 Q5VV41 SH3_1
PH
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
BC002681 AAH02681 Q5VV41
BC051838 AAH51838 Q5VV41
BT007270 AAP35934 Q5VV41
DQ893813 ABM84739  
DQ890637 ABM92254  
D89016 BAA13745 Q5VV41
AK095984 BAG53186 B3KTS4
AK296150 BAG58889 B4DJM7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGEF16 NP_055263 M.musculus Arhgef16 230972 Gene Info NP_001106215 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)