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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MALSU1, Mitochondrial assembly of ribosomal large subunit 1
Sequence ID:NM_138446
Entrez Gene ID:115416
Ensembl ID:ENSG00000156928

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 23345493 - 23347389

NM_138446 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12882333893923339226
2894672334045723340635
4685492334748623347567
5507552334897423349179

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4646294Full LengthBC012331chromosome 7 open reading frame 30

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612455  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138446 NP_612455 Q96EH3 DUF143

Related Sequences

 
mRNAGenPeptSwissProt
BC012331 AAH12331 Q96EH3
AK316559 BAG38148 Q96EH3
AK127742 BAG54562 Q96EH3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MALSU1 NP_612455 M.musculus 2410003K15Rik 75593 Gene Info NP_083629 74
R.norvegicus RGD1306936 297082   NP_001100063 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)