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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CAB39L, calcium binding protein 39-like
Sequence ID:NM_001079670
NM_030925
Entrez Gene ID:81617
Ensembl ID:ENSG00000102547

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 49883943 - 49957028

 Exon Info From UCSC:
NM_001079670
NM_030925

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3956127Full LengthBC010993calcium binding protein 39-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079670 NP_001073138 Q9H9S4  
NM_030925 NP_112187   Mo25

Related Sequences

 
mRNAGenPeptSwissProt
BC010993 AAH10993 Q9H9S4
AY211923 AAO65176 Q86WE6
AY288977 AAQ93064 Q9H9S4
AK022639 BAB14147 Q9H9S4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAB39L NP_001073138 M.musculus Cab39l 69008 Gene Info NP_081184 99
R.norvegicus Cab39l 290291   NP_001011917 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)