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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HCN4, hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Sequence ID:NM_005477
RefSeqGene ID:NG_009063
Entrez Gene ID:10021
Ensembl ID:ENSG00000138622

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 73613934 - 73661177

NM_005477 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1941087361220073616289
410942737361642973616593
427445147361729573617535
451546617361763873617784
466248807362191373622131
488150427362447173624632
504354667363572573636148
546772457365982673661604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069165Full LengthBC172471hyperpolarization activated cyclic nucleotide-gated potassium channel 4
100061800BC156298hyperpolarization activated cyclic nucleotide-gated potassium channel 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005468  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005477 NP_005468 Q9Y3Q4 cNMP_binding
Ion_trans
Ion_trans_N

Related Sequences

 
mRNAGenPeptSwissProt
BC156298 AAI56299  
BC172471 AAI72471  
AJ132429 CAB42604 Q9Y3Q4
AJ238850 CAB52754 Q9Y3Q4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HCN4 NP_005468 M.musculus Hcn4 330953 Gene Info NP_001074661 96
R.norvegicus Hcn4 59266   NP_067690 96
A.thaliana KAT1 834666   NP_199436 23
A.thaliana KAT2 827555   NP_193563 23

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)