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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LIN28A, Lin-28 homolog A (C. elegans)
Sequence ID:NM_024674
Entrez Gene ID:79727
Ensembl ID:ENSG00000131914

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_024674 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11452673726826737412
1463422673787626738072
3435272675179326751977
52840132675273226756217

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3841184Full LengthBC028566lin-28 homolog (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078950  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024674 NP_078950 Q9H9Z2 zf-CCHC
CSD

Related Sequences

 
mRNAGenPeptSwissProt
BC028566 AAH28566 Q9H9Z2
AF521099 AAM77751 Q9H9Z2
DQ893398 ABM84324  
DQ896719 ABM87718  
AK022519 BAB14075 Q9H9Z2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LIN28A NP_078950 R.norvegicus Lin28a 500562   NP_001102739 98
M.musculus Lin28a 83557 Gene Info NP_665832 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)